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A comparative account of protein structure prediction resources, feature-validations and application-based categorizations

Gene3D

Tool nameGene3D
URLhttp://gene3d.biochem.ucl.ac.uk/
Important featuresUsed for CATH domain assignment to an unknown sequence.
CitationsBuchan DW, Shepherd AJ, Lee D, Pearl FM, Rison SC, Thornton JM, Orengo CA. Gene3D: structural assignment for whole genes and genomes using the CATH domain structure database. Genome Res. 2002 Mar;12(3):503-14. PubMed PMID: 11875040. Yeats C, Lees J, Reid A, Kellam P, Martin N, Liu X, Orengo C. Gene3D: comprehensive structural and functional annotation of genomes. Nucleic Acids Res. 2008 Jan;36(Database issue):D414-8. Epub 2007 Nov 21. PubMed PMID: 18032434.
Year of publication2002
Rank by usage frequency100
Comments
FunctionDatabase, Domain Prediction
CategoryOnline/Downloadable
Platform
Other features
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